Projects

Ongoing projects

	Description	Field
Alya performance benchmark	Alya performance benchmark	Computational fluid dynamics
Bolin Centre software management through local modules - trial evaluation.	Set up and evaluate a local module system on Triolith for Bolin Centre software installations.	Climate research
Comparative study of major ab initio software for materials science	Comparing major ab initio software for materials science	Computational materials science
Essense Code Optimisation	Essense Code Analysis and Optimisation	Computational fluid dynamics Computational science
Improved FFT and I/O for the Pencil code	Enabling support as part of the Prace DECI 8 program	Computational astrophysics
Nek5000 BC	Boundary conditions for Nek5000	Computational fluid dynamics
Nek5000 OpenACC	Nek5000 with OpenACC	Computational fluid dynamics
Nordic collaboration on e-infrastructures for Earth System Modeling	NeIC climate and environment collaborative project.	Climate research
Parallel FFTs in Molsim	Performance improvement of the SPME in Molsim	Computational chemistry
Parallel Programming Education	Training in parallel programming	Computational science HPC training
Parallelization of a materials science code	Parallelization request for a materials science code	Computational materials science Computational science
Patchwork	Patchwork: Bioinformatic tool for allele-specific copynumber analysis of tumor samples	Bioinformatics Cancer
SNIC Emerging Technologies	Coordinating new and emerging technologies within SNIC.	Emerging technologies
SNIC Science Cloud	SNIC Science Cloud is a cloud computing infrastructure run by SNIC.	Cloud computing
SNIC coordinated training	SNIC coordinated training	HPC training
Snicdocs	A knowledgebase of user oriented information in Swedish academic high performance computing.
Test suite for VASP	Test suite for VASP	Computational materials science

Completed projects

	Description	Field	Start	End
BILS websearch	BILS Web Search	Software development	4 June 2012	4 February 2013
Computer-Aided Drug Design	Ab-initio Electronic Structure Computation through LSDALTON Code	Computational chemistry Computational science	1 November 2012	30 June 2014
Configuration of CAM5.3 nudged to ERA-Interim reanalysis and related post-processing software	Assist researchers from Stockholm in configuring and launching the CAM5.3 global atmospheric model in a nudged configuration. Assist in installing post-processing software for converting CAM5.3 output to arl format suitable for imput into the HYSPLIT Lagrangian transport model.	Climate research	1 July 2016	30 November 2016
Dalton CPP-LR parallelization	Parallelization of the coupled cluster complex polarization propagator module in the Dalton program	Computational chemistry Computational science	13 December 2012
Develop multi-category LIM3 sea-ice capabilities in EC-Earth 3	Feature request to support multi-category sea-ice in the IFS component of EC-Earth 3.	Climate research	1 April 2013	31 August 2013
EC-Earth compilation and performance analysis: Beskow	Port EC-Earth to Beskow and complete performance/scaling tests.	Climate research	16 November 2014	31 December 2014
EC-Earth/COSP code analysis	Complete performance profiling of the EC-Earth model including the COSP satellite simulator.	Climate research	1 March 2017	31 March 2017
Enabling Xnavis for Massively Parallel Simulations of Wind Farms	Parallel I/O Implementation and Communication Optimization on Xnavis Wind Farm Simulation Code	Computational fluid dynamics Computational science	1 May 2013	31 October 2013
Fido	Easy access to safe and reliable hosting and computation for Swedish bioinformatics.	Bioinformatics	20 May 2011	20 May 2014
HYPE Code Parallelisation	Performance Analysis and Parallelisation of SMHI's HYPE Code	Computational science Climate research	1 December 2012	30 January 2013
Implementation of parallel NetCDF output and COSP in OpenIFS	Assist researchers from Göteborg in including parallel NetCDF IO support and the COSP module in the OpenIFS model	Climate research	1 June 2016	31 December 2016
Improving MPI communication latency on euroben kernels	Improving the MPI collective performance by network aware communication	Computational science	1 July 2010	30 June 2012
Infrastructure for the European Network for Earth System modelling - Phase 2	European network of distributed e-infrastructure to support Earth system modelling.	Climate research	1 April 2013	31 March 2017
Integration of OpenIFS into EC-Earth3	Replace the atmospheric component of EC-Earth (IFS) with the OpenIFS model (c38r1).	Climate research	1 November 2014	31 May 2015
LES Code Parallelization	Parallelization of a Large Eddy Simulation Code	Computational fluid dynamics	1 March 2011	29 February 2012
MDR model library update	Updating the automated classification system for MDR proteins based on new data.	Bioinformatics	1 January 2013	31 December 2013
MIMICA code analysis	Complete performance profiling of the MISU MIT Cloud and Aerosol (MIMICA) LES model.	Climate research	1 January 2017	31 May 2017
NSC GPU and Accelerator Pilot	GPU/Accelerator Pilot Project at NSC	Computational science	1 April 2012	31 December 2012
NorESM code analysis	Complete performance profiling of the Norwegian Earth System Model (NorESM) on Triolith.	Climate research	1 October 2014	31 December 2014
Optimization of a lagrangian cloud parcel model for use in the global climate model ECHAM6.1-HAM2.2	Serial optimization of a cloud parcel model for embedding in a the ECHAM-HAM global climate model.	Climate research	1 April 2015	31 May 2015
PRACE WP12: Network topology analysis and efficient collective design	Network topology analysis and efficient collective design and	Computational science	1 September 2011	31 August 2013
Parallel I/O Implementation on the Multiple Sequence Alignment Software ClustalW-MPI	Parallel I/O Implementation on the Multiple Sequence Alignment Software ClustalW-MPI	Bioinformatics Computational science	1 August 2012	31 May 2013
PconsC for Fido	Web hosting for PconsC	Bioinformatics	7 September 2013	10 March 2014
Performance Analysis of ad OSS Program	Performance Analysis of ad_OSS Program for Modeling Water Molecules	Computational chemistry Computational science	1 May 2012	31 May 2012
Performance Benchmark of NEMO Oceanography Code	Application Benchmark of NEMO Oceanography Code on CURIE Tier-0 System	Computational science Climate research	1 July 2012	30 June 2013
Petascaling enabling and support for EC-EARTH3	Petascaling of high resolution EC-EARTH on PRACE Tier-0 Curie System	Computational science	1 July 2010	30 June 2012
Portability performance analysis and improvement of ESM	Porting and performance analysis of earth system models (ESM) on different architectures	Computational science	1 September 2009
Porting Earth system models to triolith	Port three commonly used Earth system models to triolith.	Climate research	1 February 2013	31 March 2013
Synthetic Benchmark on Curie	Synthetic Benchmark for PRACE Tier-0 Curie System	Computational science	1 July 2010	30 June 2012
Technical development of the EC-Earth3 Single Column Model (SCM)	Configure a coupled, single column model version of EC-Earth3 (OpenIFS, oasis3-mct, nemo3.6)	Climate research	1 October 2015	31 May 2016