Search by property

This page provides a simple browsing interface for finding entities described by a property and a named value. Other available search interfaces include the page property search, and the ask query builder.

List of results

• Ccp4  + (determining macromolecular structures by X-ray crystallography)
• MOLDEN  + (display ab initio molecular densities)
• Ruby  + (dynamic, reflective, general-purpose object-oriented programming language)
• MKL  + (efficient mathematics library)
• ACML  + (efficient mathematics library)
• CASTEP  + (electronic structure calculation)
• VASP  + (electronic structure calculation)
• Greens  + (electronic structure codes based on the KKRASA Green's function technique)
• Muscle  + (fast, high-quality multiple sequence alignment)
• Meep  + (finite-difference time-domain simulation software package)
• Abaqus  + (finite-element package)
• ASE  + (framework for setting up and analyzing atomistic simulations)
• OpenFOAM  + (free, open source CFD software package by OpenCFD Ltd)
• Exciting-code  + (full-potential all-electron density-functional-theory (DFT) package based on the linearized augmented plane-wave (LAPW) method)
• EC-Earth  + (global climate model)
• NorESM  + (global climate model)
• CESM1  + (global climate model)
• SAM  + (hidden Markov model analysis of biological sequences)
• Category:Performance optimisation  + (improving the computational efficiency of an application)
• Category:Bioinformatics  + (information handling in biology)
• Shake n bake  + (is a computer program based on Shake-and-Bake, a dual-space direct-methods procedure for determining crystal structures from X-ray diffraction data.)
• Hkl2map  + (is a graphical user-interface for macromolecular phasing)
• Pymol  + (is a molecular visualization system.)
• Shelx  + (is a set of programs for the determination of small (SM) and macromolecular (MM) crystal structures by single crystal X-ray and neutron diffraction.)
• Phenix  + (is a software suite for the automated determination of macromolecular structures using X-ray crystallography and other methods)

• ANSYS  + (large modeling suite)

• Yambo  + (many-body calculations in solid state and molecular physics)
• Inspector  + (memory error and thread checker)
• Amber  + (molecular dynamics)
• ESPResSo  + (molecular dynamics of soft matter systems)
• Desmond  + (molecular dynamics package)
• Mafft  + (multiple sequence alignment program)
• Octave  + (numerical computation and visualisation language)
• Category:HPC training  + (offering training and education to the SNIC communities in HPC related matters.)
• Open MPI  + (open source [[MPI]] library)
• SciPy  + (open-source software for mathematics, science, and engineering.)
• Category:Performance tuning  + (optimisation of simulation applications with respect to an optimal use of hardware features.)
• Category:Neuroinformatics  + (organization of neuroscience data)
• BLAST  + (package for aligning nucleotide or amino acid sequences)
• FASTA  + (package for aligning nucleotide or amino acid sequences)
• PHYLIP  + (package for inference of phylogenies)
• Simson  + (package for solving the Navier-Stokes equations for incompressible channel and boundary layer flows)
• HMMER  + (package for working with profile hidden Markov models (HMM))
• Environment modules  + (package to manage the systems and application software)
• NAMD  + (parallel molecular dynamics code)
• Test training 2014  + (parallel performance optimization tools)
• Test training 2012  + (parallel performance optimization tools)
• Dacapo  + (plane-wave DFT)
• CPMD  + (plane-wave DFT)
• GENE  + (plasma microturbulence code)
• ClustalW  + (popular multiple sequence aligner)