From SNIC Documentation
Cufflinks is designed to assemble the transcripts in an RNA-Seq sample and calculate their abundances (in transcript-level RPKM).
|Kalkyl||UPPMAX||cluster resource of about 21 TFLOPS|
Tips and tricks
Any further license particularities (such as site licenses) are succinctly described here.
ExpertsNo experts have currently registered expertise on this specific subject. List of registered field experts:
|Field||AE FTE||General activities|
|Henric Zazzi (PDC)||PDC||Bioinformatics||100100||Bioinformatics Application support|
|Joel Hedlund (NSC)||NSC||Bioinformatics||00|
|Martin Dahlö (UPPMAX)||UPPMAX||Bioinformatics||1010||Bioinformatic support|
|Sebastian DiLorenzo (UPPMAX)||UPPMAX||Bioinformatics||5050||National bioinformatic support, NGS tumor data|