[[image:SNIClogo_150.png|link=http://www.snic.se]]
Welcome to the general SNIC knowledge base and documentations site.
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...d not only for the owner of the badly behaving jobs. For this reason, most SNIC resources have amenities in place to aid you in running your HMMER jobs in
...et to the correct value if you are using a preinstalled HMMER version on a SNIC resource.
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[[NSC]] has a site license that allows SNIC users to run {{PAGENAME}} without restrictions.
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...d not only for the owner of the badly behaving jobs. For this reason, most SNIC resources have amenities in place to aid you in running your BLAST jobs in
...cant increase in speed. If you are using a preinstalled BLAST version on a SNIC resource, the recommended number of cores to use is given by the <code>$BLA
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...virtual meeting room in which you can discuss the services offered by the SNIC centres and how they can be used for your computational needs, help you pro
...at are not directly regarding how to run a given application on a specific SNIC HPC resource, but regarding how to use the application itself or how to sol
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...ping University, with presentations by application experts from different SNIC centers. The presented software include for instance VASP, Quantum Espresso
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* [http://www.nsc.liu.se/systems/snic/ NSC user guide for SNIC resources]
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* [http://www.nsc.liu.se/systems/snic/ NSC SNIC resource user guide]
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* [http://www.nsc.liu.se/systems/snic/ NSC SNIC resource user guide]
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[[category:SNIC centre]]
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...minimal explanation of things that may steal a person away from their pure SNIC expertry engagement at a regular basis, like part time employments, parenta
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This page lists all the active SNIC application experts registered on this site. You can click the username for
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* [[List of systems experts]], list of all SNIC systems experts registered on this site.
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This page lists software in use at various SNIC centres. Note that the centres can in most cases install additional softwar
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This property indicates association to a [[:Category:SNIC centre|SNIC centre]], e.g. for a [[:Category:Resource|resource]] or person.
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A SNIC computational resource, usually a linux cluster for high performance comput
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: At least one SNIC centre has a site license that enables at least some of its users to use th
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...''' Please see https://snic.se/resources/, the SNIC rounds in https://supr.snic.se/round/, or respective centre homepages.
This page lists the various high performance computing resources within SNIC.
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...given by [[User:Chandan_Basu_(NSC)|Chandan Basu]] from [[NSC|Nsc]] to the SNIC [[Application_experts|application expert]] group meeting, 19 - 20 Sept, C3S
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[[category:SNIC centre]]
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[[category:SNIC centre]]
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[[category:SNIC centre]]
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[[category:SNIC centre]]
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[[category:SNIC centre]]
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This page provides quick links to the SNIC centre articles:
{{#ask: [[Category:SNIC centre]]|format=ul}}
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This page lists all SNIC systems experts registered on this site. You can click the username for any
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This page lists all SNIC resources that are registered on this site.
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All SNIC resources
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* SNIC
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...me in finding out which library performs best with your specific software. SNIC centres often have multiple MPI libraries installed, so contact [[Support|c
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...me in finding out which library performs best with your specific software. SNIC centres often have multiple MPI libraries installed, so contact [[Support|c
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...a single node. The HPC clusters available at the [[:Category:SNIC_centre|SNIC centres]] provide high performance communication networks to minimise the m
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...tes how large a percentage of a full time employment a person is funded by SNIC for application expertise. This property is only relevant for [[Application
...50% are financed to 60% by SNIC and to 40% by NSC, this person should have SNIC AE financing=30.
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...tise part of a person's employment, excluding [[Property:SNIC AE financing|SNIC AE financing]]. Ideally, it should not be longer than a single word. In pri
...FTE|FTE]] with application expertise, and those 50% are financed to 60% by SNIC and to 40% by NSC, this person should have Other AE financing=NSC 20%.
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...[http://www.nsc.liu.se/start/apply/] for information on how to apply for a SNIC project. Contact: support@nsc.liu.se.
...stored. To join the 'cesm_input-data' project, log into SUPR (https://supr.snic.se/) and click the 'View and Manage Projects' button, the request membershi
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|financing=SNIC, BILS
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* SNIC
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== SNIC projects ==
{{#ask: [[Category:Project]] [[project active::true]] [[project financing::SNIC]]
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From SNIC, [https://snicdocs.nsc.liu.se/wiki/User:Soon-Heum_Ko_(NSC) Soon-Heum "Jeff"
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|financing=SNIC
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|financing=SNIC
...ations. The VASP program is a major workload component (up to 50%) on many SNIC resources. Unfortunately, the VASP program does not come with its own test
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|financing=SNIC
* [[Help:Management|Managerial views]] for SNIC
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* 13:40 SNIC update and news (Jacko Koster)
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|financing=SNIC
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|description=Introduction to using SNIC Cloud resources
The workshop is aimed at users and potential users of SNIC Cloud resources who want to learn the basics of using the cloud. A lecture
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|financing=SNIC
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...[[User:Joachim_Hein_(LUNARC)|Joachim Hein]] from [[LUNARC|Lunarc]] to the SNIC [[Application_experts|application expert]] group, when they met in Götebor
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|financing=SNIC
This activity is now part of the [[SNIC coordinated training]]. Future course will be announced on the [[Training]
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|financing=SNIC
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|financing=SNIC
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...[http://www.nsc.liu.se/start/apply/] for information on how to apply for a SNIC project. Contact: support@nsc.liu.se.
...stored. To join the 'cesm_input-data' project, log into SUPR (https://supr.snic.se/) and click the 'View and Manage Projects' button, the request membershi
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|financing=SNIC
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|financing=SNIC
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|financing=SNIC
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|description=SNIC coordinated training
|financing=SNIC
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This page lists all the SNIC application experts who are registered on this site, but who are currently
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|financing=SNIC/SciLifeLab
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|financing=SNIC
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|financing=SNIC
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...rmance computed related training available to users and personnel of the [[SNIC]].
== Training events offered or supported by SNIC ==
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...he course will also apply to system hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...formance computed related training offered to users and personnel of the [[SNIC]] in the past.
== Training events offered or supported by SNIC in 2022 ==
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...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
...mance considerations for non-uniform memory access hardware (e.g. nodes of SNIC HPC clusters)
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|description=Speeding up MATLAB Computations using SNIC Clusters
...and on large clusters. The Swedish National Infrastructure for Computing (SNIC) allows researchers to apply for usage of MATLAB Distributed Computing Serv
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|description=Speeding up MATLAB Computations using SNIC Clusters
...and on large clusters. The Swedish National Infrastructure for Computing (SNIC) allows researchers to apply for usage of MATLAB Distributed Computing Serv
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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Most [[SNIC]]-clusters use [[Linux]] for their operating systems. These typically incl
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...ow: {{PAGENAME}} |?description}} on a cluster. It is widely used on the [[SNIC]]-[[resources]] to provide efficient access to the installed software. It
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...he course will also apply to system hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|description=Speeding up MATLAB Computations using SNIC Clusters
...and on large clusters. The Swedish National Infrastructure for Computing (SNIC) allows researchers to apply for usage of MATLAB Distributed Computing Serv
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|description=Speeding up MATLAB Computations using SNIC Clusters
...and on large clusters. The Swedish National Infrastructure for Computing (SNIC) allows researchers to apply for usage of MATLAB Distributed Computing Serv
1,013 bytes (146 words) - 09:58, 24 September 2014
...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
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|financing=SNIC
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|financing=SNIC
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Organised by SeSE and SNIC-UPPMAX. Participation is free of charge.
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|financing=SNIC
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|description=Introduction to using SNIC Cloud resources
The workshop is aimed at users and potential users of SNIC Cloud resources who want to learn the basics of using the cloud. A lecture
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|description=Coordinating new and emerging technologies within SNIC.
|financing=SNIC
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...he course will also apply to system hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...ccess to a national licence of Allinea [[DDT]] - available to users of all SNIC centres. Allinea DDT facilitates debugging of C, C++ and Fortran sources a
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...d have the ability to rewrite their scientific Matlab codes for use on the SNIC HPC resources.
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|financing=SNIC
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...he course will also apply to system hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
1 KB (201 words) - 08:28, 24 September 2015
...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...thout instrumenting or recompiling code. This tool is now available on all SNIC sites.
...vanced parallel debugger available to the HPC market (now available on all SNIC sites) and
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Welcome to this workshop on scientific visualisation organised by SNIC-UPPMAX!
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...thout instrumenting or recompiling code. This tool is now available on all SNIC sites.
...vanced parallel debugger available to the HPC market (now available on all SNIC sites) and
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|financing=SNIC
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...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
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A half-day seminar aimed at any UPPMAX or SNIC user who deals with large data volumes — many files, or large files, or b
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A half-day seminar aimed at any UPPMAX or SNIC user who deals with large data volumes — many files, or large files, or b
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|description=Introduction seminar and workshop to SNIC Cloud resources
The workshop is aimed at users and potential users of SNIC Cloud resources. This time we would like to discuss advanced topics like vi
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|description=SNIC Science Cloud is a cloud computing infrastructure run by SNIC.
|financing=SNIC
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|description=Parallel Computing in MATLAB and Scaling to SNIC HPC Clusters
...tionally intensive MATLAB algorithms and scale parallel jobs to multi-node SNIC HPC resources.
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|description=Parallel Computing in MATLAB and Scaling to SNIC HPC Clusters
...tionally intensive MATLAB algorithms and scale parallel jobs to multi-node SNIC HPC resources.
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|description=Parallel Computing in MATLAB and Scaling to SNIC HPC Clusters
...tionally intensive MATLAB algorithms and scale parallel jobs to multi-node SNIC HPC resources.
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|description=Parallel Computing in MATLAB and Scaling to SNIC HPC Clusters
...tionally intensive MATLAB algorithms and scale parallel jobs to multi-node SNIC HPC resources.
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|description=Parallel Computing in MATLAB and Scaling to SNIC HPC Clusters
...tionally intensive MATLAB algorithms and scale parallel jobs to multi-node SNIC HPC resources.
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|description=Material for technical training and workshops hosted by SNIC Science Cloud.
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Welcome to this workshop on scientific visualisation organised by SNIC-UPPMAX!
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...ld bring their own laptop capable of accessing HPC services as provided by SNIC - we will be using Lunarc’s Aurora service for the hands-on part of the w
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|financing=SNIC
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|financing=SNIC
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|description=SNIC Science Cloud Workshop
This workshop addresses user and potential users of the SNIC Science Cloud. It will discuss the following topics:
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|description=SNIC Science Cloud Workshop
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This one-day programme will run in three SNIC sites, demonstrating how the latest Allinea tool suite supports more effici
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This one-day programme will run in three SNIC sites, demonstrating how the latest Allinea tool suite supports more effici
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This one-day programme will run in three SNIC sites, demonstrating how the latest Allinea tool suite supports more effici
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...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
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'''SNIC can not take responsibility for the contents provided by external sources o
...he scheduler, having some knowledge about it is required when working at a SNIC installation. On the SLURM website you can access the [https://slurm.sched
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|financing=SNIC
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|financing=SNIC
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|financing=SNIC
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|description=SNIC Cloud Computing Workshop
The SNIC Science Cloud (SSC) is a community cloud for research within Swedish academ
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...cOS, UNIX and Linux to an HPC cluster. The event will further discuss the SNIC national storage system.
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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The Lunarc HPC Desktop provides Lunarc and SNIC users with a solution for hardware accelerated remote visualization that wi
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The Lunarc HPC Desktop provides Lunarc and SNIC users with a solution for hardware accelerated remote visualization that wi
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...d training in HPC. It is open to users and prospective users from all six SNIC HPC centres and academics throughout the Nordic region. Participants do no
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...e [https://neic.no/ Nordic e-Infrastructure Collaboration (NeIC)] in which SNIC is a partner.
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...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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|description=SNIC Science Cloud Workshop
The SNIC Science Cloud (SSC) invites all interested current and future users to a tr
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...cOS, UNIX and Linux to an HPC cluster. The event will further discuss the SNIC national storage system.
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...uidance on how to navigate the module system deployed at Lunarc and within SNIC.
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...boration with PRACE, the Partnership for Advanced Computing in Europe, PDC/SNIC is offering a two-day workshop focusing on modern tools in HPC. The worksho
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...e in January, Tetralith will be the most powerful HPC service available to SNIC users. The course will give an overview on the system, how to work with it
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...e in January, Tetralith will be the most powerful HPC service available to SNIC users. The course will give an overview on the system, how to work with it
1 KB (226 words) - 13:44, 1 November 2018
...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...cOS, UNIX and Linux to an HPC cluster. The event will further discuss the SNIC national storage system.
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The LUNARC HPC Desktop provides SNIC users with a solution for hardware accelerated remote visualization that wi
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...for research by Swedish research groups. Access to Tetralith is granted by SNIC.
...click the 'View and Manage Projects' button, the request membership to the SNIC 2020/14-98 project.
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...ccount before the seminar starts). Weine is the main expert on VASP within SNIC so if you use VASP for research, be sure to make the most of this opportuni
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...e course will also apply to systems hosted at other HPC centres in Sweden (SNIC) or beyond (e.g. Prace). Participation is open to all existing and prospect
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...for research by Swedish research groups. Access to Tetralith is granted by SNIC.
...click the 'View and Manage Projects' button, the request membership to the SNIC 2020/14-98 project.
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...here is a SNIC wide license for ARM FORGE and the tool is available at all SNIC centres, not only LUNARC.
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* Running VASP at the SNIC centers HPC2N, NSC, and PDC
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...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
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The NSC SNIC/PRACE webinar will present useful tools and best practices for working effe
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...molecular Research) and the Swedish National Infrastructure for Computing (SNIC).
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In this online PRACE/SNIC workshop hosted by NSC, including seminars and hands-on sessions, we will c
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...plains key features of a contemporary HPC cluster, such as deployed within SNIC and by LUNARC. It will explain the principles behind the job scheduler and
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...NSC suitable for new users, topics include the Sigma (LiU) and Tetralith (SNIC) clusters, the module system, submitting jobs, allocating GPU:s for simulat
The zoom link is distributed in the SNIC training newsletter.
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In this course, which is being organised by PDC in its role as a SNIC PRACE training centre, you will learn what parallelization means, and how t
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This HPC2N/SNIC course is part of the PRACE Training courses. It is open for participants f
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* A short introduction suitable for new users to the NSC Tetralith (SNIC) and Sigma (LiU) clusters. Topics include the module system, submitting job
The zoom link is distributed in the SNIC training newsletter.
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This HPC2N/SNIC course is also part of the PRACE Training courses. It is thus open for acad
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...NSC suitable for new users, topics include the Sigma (LiU) and Tetralith (SNIC) clusters, the module system, submitting jobs, allocating GPU:s for simulat
The zoom link is distributed in the SNIC training newsletter.
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The zoom link is distributed in the SNIC training newsletter.
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In this online PRACE/SNIC workshop hosted by NSC, including seminars and hands-on sessions, we will c
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...plains key features of a contemporary HPC cluster, such as deployed within SNIC and by LUNARC. It will explain the principles behind the job scheduler and
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...tectures such as modern multi core systems or a single compute node of the SNIC HPC clusters.
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|description=Handling large data within SNIC, using Swestore
...quiring data access from multiple SNIC services, are encouraged to utilise SNIC’s Swestore system.
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...m. Inside the meeting room we like to discuss the services offered by the SNIC centres and how they can be used for your computational needs, help you pro
...offering a broad area of expertise. The event is open to current users of SNIC resources and academics interested in using the resources in the future.
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...plains key features of a contemporary HPC cluster, such as deployed within SNIC and by LUNARC. It will explain the principles behind the job scheduler and
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Participation is open to all existing and prospective SNIC users.
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=== Online material for the SNIC training "Awk workshop" ===
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=== Online material for the SNIC training "Basic Singularity workshop" ===
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The course forms part of the SNIC training program. It is offered as a collaborative effort between [https:/
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* A short introduction suitable for new users to the NSC Tetralith (SNIC) and Sigma (LiU) clusters. Topics include the module system, submitting job
The zoom link is distributed in the SNIC training newsletter.
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