Difference between revisions of "Triolith"

Latest revision as of 08:52, 18 August 2015

Name	Triolith
Description	Capability cluster with 338 TFLOPS peak and 1:2 Infiniband fat-tree
Resource type	compute
Centre	NSC
Is active	yes
Start date	July 2012
End date	July 2016

Software	Field	License	Description
7.5.D Guidelines for D7.5.pdf
ABINIT	Computational chemistry Computational materials science	Free	density-functional theory code
ABINIT
ABINIT
ABINIT
ABINIT
ABINIT
ABySS	Bioinformatics	Free	A parallel assembler for short read sequence data
ABySS
ABySS
ABySS
ABySS
ABySS
ACML	System tool Numerical library	Requires license	efficient mathematics library
ACML
ACML
ACML
ACML
ACML
AE FTE
AE financing
ANFO	Bioinformatics	Free	A parallel assembler for short read sequence data
ANFO
ANFO
ANFO
ANFO
ANFO
ANNOVAR	Bioinformatics	Free	Functional annotation of genetic variants from high-throughput sequencing data
ANNOVAR
ANNOVAR
ANNOVAR
ANNOVAR
ANNOVAR
ANSYS	Computational fluid dynamics	Requires license	large modeling suite
ANSYS workshop: Using HPC and Reduced Order Models for ANSYS simulations (April 2020)	Scientific computing		ANSYS workshop: Using HPC and Reduced Order Models for ANSYS simulations
ANSYS
ANSYS
ANSYS
ANSYS
ANSYS
ARCclient
ARM HPC hands on workshop (Feb 2020)	Scientific computing		Introduction to PDC
ASE	Computational materials science	Free	framework for setting up and analyzing atomistic simulations
ASE
ASE
ASE
ASE
Ab wtp	Bioinformatics	Free	Alignment tool for SOLiD transcript reads
Ab wtp
Ab wtp
... further results

More information about available software on Triolith will be published soon.

@@ Line 1: / Line 1: @@
 {{resource info
 |description=Capability cluster with 338 TFLOPS peak and 1:2 Infiniband fat-tree
-|production=yes
+|is active=yes
-|commissioning date=July 2012
+|start date=July 2012
-|decommissioning date=July 2016
+|end date=July 2016
 |resource type=compute
 |centre=NSC
-|software=ansys,ARC client,Blast,clustalw,comsol,CPMD,CP2K,EMTO,EMTOx,exciting-code, elk,Fluent,gaussian,gnuplot,grace,gromacs,hmmer,Inspector,Intel compiler suite,Intel MPI,lammps,mathematica,matlab,mkl,molden,openmpi,p4vasp,povray,R,rosetta,ruby,sam,schrodinger,siesta,swig,totalview,Trace analyzer and collector,vasp,vmd,VTune Amplifier,WIEN2k,Yambo
+|software=ansys,ARC
+client,Blast,clustalw,comsol,CPMD,CP2K,Coot,EMTO,EMTOx,exciting-code,
+elk,Fluent,gaussian,gnuplot,grace,gromacs,hmmer,Inspector,
+Intel compiler suite,Intel MPI,
+lammps,mathematica,matlab,mkl,molden,openmpi,p4vasp,povray,R,rosetta,ruby,sam,schrodinger,siesta,swig,totalview,Trace
+analyzer and collector,vasp,vmd,VTune Amplifier,WIEN2k,Yambo,Shake n bake,
+ccp4, amber, cdo,cif2cell, cmake, code_saturne, dl_poly, fasta, ferret,
+gamess-us, gaussview, GNU compiler collection, graphviz, grib_api, gribex, hdf5, hkl2map, namd,
+ncl, nco, ncview, netcdf, nwchem, octopus, openbabel, orca, phenix, phonopy,
+pymol, qdalton, scalasca, shelx, tau, trilinos, vesta,
+xcrysden, xds, yambo,NMRPipe
 }}