https://docs.snic.se/w/api.php?action=feedcontributions&feedformat=atom&user=Sebastian+DiLorenzo+%28UPPMAX%29 2026-05-13T11:12:57Z User contributions MediaWiki 1.31.10 https://docs.snic.se/w/index.php?title=User:Sebastian_DiLorenzo_(UPPMAX)&diff=5451 2013-09-27T14:54:03Z

<p>Sebastian DiLorenzo (UPPMAX): </p> <hr /> <div>{{application expert info<br /> |first name=Sebastian<br /> |last name=DiLorenzo<br /> |centre=UPPMAX<br /> |fields=Bioinformatics<br /> |fte=50<br /> |snic ae financing=50<br /> |image=sebbe_headshot.jpg<br /> |financing=SNIC,SciLifeLab<br /> |office= Entrance 61, 3rd floor, Akademiska Sjukhuset, Uppsala<br /> |general activities=National bioinformatic support, NGS tumor data<br /> |start date=<br /> |end date=<br /> |is active=yes<br /> }}<br /> <br /> == Expertise ==<br /> * [[expertise::R]]<br /> * [[expertise::NGS Tumor data]]<br /> * [[expertise::Tumor copynumber analysis]]<br /> <br /> == Projects ==<br /> * [[project::Patchwork]]</div>

Sebastian DiLorenzo (UPPMAX) https://docs.snic.se/w/index.php?title=User:Sebastian_DiLorenzo_(UPPMAX)&diff=5450 2013-09-27T14:53:23Z

<p>Sebastian DiLorenzo (UPPMAX): </p> <hr /> <div>{{application expert info<br /> |first name=Sebastian<br /> |last name=DiLorenzo<br /> |centre=UPPMAX<br /> |fields=Bioinformatics<br /> |fte=50<br /> |snic ae financing=50<br /> |image=sebbe_headshot.jpg<br /> |financing=SNIC,SciLifeLab<br /> |office= Entrance 61, 3rd floor, Akademiska Sjukhuset, Uppsala<br /> |general activities=National bioinformatic support, NGS tumor data<br /> |start date=<br /> |end date=<br /> |is active=yes<br /> }}<br /> <br /> == Expertise ==<br /> * [[expertise::R]]<br /> * [[expertise::NGS Tumor data]]<br /> * [[expertise::Tumor copynumber analysis]]<br /> <br /> == Projects ==<br /> * [[project::Patchwork: Bioinformatic tool for allele-specific copynumber analysis of tumor samples]]</div>

Sebastian DiLorenzo (UPPMAX) https://docs.snic.se/w/index.php?title=Patchwork&diff=5449 2013-09-27T14:52:16Z

<p>Sebastian DiLorenzo (UPPMAX): Initial adding of project</p> <hr /> <div>{{project info<br /> |description=Patchwork: Bioinformatic tool for allele-specific copynumber analysis of tumor samples<br /> |fields=Bioinformatics, cancer<br /> |financing=SNIC/SciLifeLab<br /> |active=yes<br /> |start date=2012-06-01<br /> |end date=2013-10-01<br /> }}<br /> <br /> Patchwork is a bioinformatic tool for analyzing and visualizing allele-specific copy numbers and loss-of-heterozygosity in cancer genomes. The data input is in the format of whole-genome sequencing data which enables characterization of genomic alterations ranging in size from point mutations to entire chromosomes. High quality results are obtained even if samples have low coverage, ~4x, low tumor cell content or are aneuploid. <br /> <br /> Patchwork is available for two data types. Patchwork takes BAM files as input whereas PatchworkCG takes input from CompleteGenomics files. <br /> <br /> http://patchwork.r-forge.r-project.org/<br /> <br /> Publication: http://genomebiology.com/2013/14/3/R24/abstract<br /> <br /> == Members ==<br /> {{#ask: [[Category:Person]] [[project::{{PAGENAME}}]]<br /> |?centre<br /> |?role<br /> |?field<br /> }}</div>

Sebastian DiLorenzo (UPPMAX) https://docs.snic.se/w/index.php?title=File:Sebbe_headshot.jpg&diff=5295 2013-09-13T08:57:01Z

<p>Sebastian DiLorenzo (UPPMAX): uploaded a new version of &amp;quot;File:Sebbe headshot.jpg&amp;quot;</p> <hr /> <div>Headshot of Sebastian DiLorenzo</div>

Sebastian DiLorenzo (UPPMAX) https://docs.snic.se/w/index.php?title=User:Sebastian_DiLorenzo_(UPPMAX)&diff=5294 2013-09-13T08:52:01Z

<p>Sebastian DiLorenzo (UPPMAX): Created page with &quot;{{application expert info |first name=Sebastian |last name=DiLorenzo |centre=UPPMAX |fields=Bioinformatics |fte=50 |snic ae financing=50 |image=sebbe_headshot.jpg |financing=SNIC...&quot;</p> <hr /> <div>{{application expert info<br /> |first name=Sebastian<br /> |last name=DiLorenzo<br /> |centre=UPPMAX<br /> |fields=Bioinformatics<br /> |fte=50<br /> |snic ae financing=50<br /> |image=sebbe_headshot.jpg<br /> |financing=SNIC,SciLifeLab<br /> |office= Entrance 61, 3rd floor, Akademiska Sjukhuset, Uppsala<br /> |general activities=National bioinformatic support, NGS tumor data<br /> }}<br /> <br /> == Expertise ==<br /> * [[expertise::R]]<br /> * [[expertise::NGS Tumor data]]<br /> * [[expertise::Tumor copynumber analysis]]</div>

Sebastian DiLorenzo (UPPMAX) https://docs.snic.se/w/index.php?title=File:Sebbe_headshot.jpg&diff=5293 2013-09-13T08:51:18Z

<p>Sebastian DiLorenzo (UPPMAX): Headshot of Sebastian DiLorenzo</p> <hr /> <div>Headshot of Sebastian DiLorenzo</div>

Sebastian DiLorenzo (UPPMAX)