BLAST - Revision history

Joel Hedlund (NSC) at 12:03, 18 September 2013

2013-09-18T12:03:27Z

2011-09-21T16:41:26Z

2011-09-12T12:25:30Z

2011-09-09T18:06:10Z

2011-09-07T15:15:06Z

2011-07-08T13:06:49Z

2011-07-08T10:54:21Z

2011-07-07T19:33:20Z

2011-07-07T19:32:23Z

2011-07-07T14:03:13Z

@@ Line 4: / Line 4: @@
 |fields=bioinformatics
 }}
-[http://blast.ncbi.nlm.nih.gov/ BLAST] (basic alignment search tool) is a software {{#show: {{PAGENAME}} |?description}}, and its primary use is to search databases for sequences that are similar to a given candidate sequence.
+[http://blast.ncbi.nlm.nih.gov/ BLAST] (basic local alignment search tool) is a software {{#show: {{PAGENAME}} |?description}}, and its primary use is to search databases for sequences that are similar to a given candidate sequence.
 == Availability ==

@@ Line 5: / Line 5: @@
 }}
 [http://blast.ncbi.nlm.nih.gov/ BLAST] (basic alignment search tool) is a software {{#show: {{PAGENAME}} |?description}}, and its primary use is to search databases for sequences that are similar to a given candidate sequence.
 == Versions ==
@@ Line 29: / Line 32: @@
 * '''Choose a system with enough RAM''' <br/> Multiprocessor systems generally have more memory than single processor systems, and the database will also require proportionally less memory, since only one copy is needed in the OS file cache regardless of the number of processors using it.
 * '''Partition the search space''' <br/> For huge databases or very restricted amounts available memory it may be required to split the database into manageable chunks and process them as separate jobs.
 == License ==

@@ Line 5: / Line 5: @@
 }}
 [http://blast.ncbi.nlm.nih.gov/ BLAST] (basic alignment search tool) is a software {{#show: {{PAGENAME}} |?description}}, and its primary use is to search databases for sequences that are similar to a given candidate sequence.
 == Versions ==
@@ Line 39: / Line 36: @@
 == License ==
 {{show license}}
 == Links ==
 * [http://blast.ncbi.nlm.nih.gov/ Official website]
 * [http://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs Manual]

@@ Line 3: / Line 3: @@
 |license=free
 |fields=bioinformatics
 }}
 [http://blast.ncbi.nlm.nih.gov/ BLAST] (basic alignment search tool) is a software {{#show: {{PAGENAME}} |?description}}, and its primary use is to search databases for sequences that are similar to a given candidate sequence.

@@ Line 3: / Line 3: @@
 |license=free
 |fields=bioinformatics
-|resources=kappa;matter;neolith
+|resources=kappa;matter;neolith;beda
 }}
 [http://blast.ncbi.nlm.nih.gov/ BLAST] (basic alignment search tool) is a software {{#show: {{PAGENAME}} |?description}}, and its primary use is to search databases for sequences that are similar to a given candidate sequence.

@@ Line 2: / Line 2: @@
 |description=package for aligning nucleotide or amino acid sequences
 |license=free
-|research areas=bioinformatics
+|fields=bioinformatics
 |resources=kappa,matter,neolith
 }}